Serialized Form

  • Package de.unijena.cheminf.fragment.fingerprint

    • Class de.unijena.cheminf.fragment.fingerprint.CountFingerprint

      class CountFingerprint extends Object implements Serializable

      • Serialized Fields

        • behaveAsBitFingerprint
          boolean behaveAsBitFingerprint
          changes the behavior of the fingerprint. If behaveAsBitFingerprint == true, the count fingerprint behaves the same as a bit fingerprint.
        • definedFingerprintSize
          int definedFingerprintSize
          Private final integer storing the pre-defined fingerprint size.
        • uniqueSmilesPositionToFrequencyCountRawMap
          Map<Integer,Integer> uniqueSmilesPositionToFrequencyCountRawMap
          Result Map of a count fingerprint. When the count fingerprint is created, if there is a match between the key fragments/unique SMILES and the passed fragments with the corresponding frequencies, the position of the key fragment assigned to it during initialization is mapped to the frequency of this fragment in the molecule. So, in this map, only the positions and frequencies of the fragments are stored if a match has occurred. In the following, the map can also be referred to as a raw map.